p4ward.run.protac_prep#
- p4ward.run.protac_prep.check_ligand_matches(protac_objs, receptor_obj, ligase_obj, rdkit_ligands_cleanup)#
- p4ward.run.protac_prep.check_linker_size(protac, indices_ligs, min_linker_length, neighbour_number, matches)#
- p4ward.run.protac_prep.get_matches(protac, reclig, liglig, reference_ligs)#
- p4ward.run.protac_prep.make_indices_link(protac, indices_ligs)#
- p4ward.run.protac_prep.protac_prep(receptor_obj, ligase_obj, protac_obj, extend_flexible_small_linker, min_linker_length, neighbour_number, rdkit_ligands_cleanup)#